Last updated on 2026-01-12 13:49:08 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.61 | 256.29 | 269.90 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.52 | 205.90 | 216.42 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 29.00 | 323.15 | 352.15 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 30.00 | 416.93 | 446.93 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 18.00 | 197.00 | 215.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.99 | 276.36 | 291.35 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.94 | 238.45 | 253.39 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 563.00 | 573.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 190.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 295.00 | 305.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 248.00 | 271.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [99s/518s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.580, system: 0.040, elapsed: 2.243 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.509, system: 0.053, elapsed: 18.340 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.019, elapsed: 1.164 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.921, system: 0.837, elapsed: 129.502 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.003, elapsed: 0.544 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.965, system: 0.972, elapsed: 152.828 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.541, system: 0.033, elapsed: 4.725 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.568, system: 0.056, elapsed: 30.277 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.017, elapsed: 1.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.077, system: 0.930, elapsed: 164.880 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.003, elapsed: 0.225 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.144, system: 1.058, elapsed: 202.891 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.594, system: 0.036, elapsed: 2.567 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.344, system: 0.078, elapsed: 14.073 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.303, system: 0.015, elapsed: 0.989 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.737, system: 0.714, elapsed: 40.882 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.009, elapsed: 0.190 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.285, system: 0.362, elapsed: 1.139 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.181, system: 1.255, elapsed: 60.841 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.676, system: 0.053, elapsed: 3.263 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.617, system: 0.086, elapsed: 22.429 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.017, elapsed: 1.311 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.785, system: 0.702, elapsed: 44.258 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.006, elapsed: 0.191 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.344, system: 0.605, elapsed: 20.402 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.646, system: 1.505, elapsed: 93.148 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/209s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.633, system: 0.042, elapsed: 4.466 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.574, system: 0.058, elapsed: 25.896 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.016, elapsed: 0.532 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.255, system: 0.440, elapsed: 12.135 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.004, elapsed: 0.442 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.400, system: 0.585, elapsed: 45.184 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.606, system: 0.034, elapsed: 4.443 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.647, system: 0.074, elapsed: 25.806 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.014, elapsed: 0.574 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.318, system: 0.416, elapsed: 12.410 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.003, elapsed: 0.437 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.509, system: 0.564, elapsed: 45.199 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.559, system: 0.039, elapsed: 3.842 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.671, system: 0.130, elapsed: 23.841 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.013, elapsed: 0.541 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.467, system: 0.462, elapsed: 11.629 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.005, elapsed: 0.575 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.169, system: 0.310, elapsed: 1.903 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.909, system: 0.992, elapsed: 43.997 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.617, system: 0.029, elapsed: 4.144 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.658, system: 0.073, elapsed: 24.697 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.014, elapsed: 0.413 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.374, system: 0.418, elapsed: 9.195 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.004, elapsed: 0.320 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.833, system: 0.528, elapsed: 21.101 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.522, system: 1.088, elapsed: 61.257 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64