d48e4647ed880d6576b531b9628392d1 *DESCRIPTION
7c613679e7e1c1d0680b9a1c54e44643 *NAMESPACE
dfa4cc39c9ed02461151570c6d86e204 *NEWS.md
1a79b9271c968a55f7e952c951276269 *R/calc_population.R
05c1718ccdc4777a076f74c2fb725d06 *R/check-data.R
ab89c0afe900cc4e74c882e36c58b3d8 *R/define-s4-class.R
27ef6b3add4e2c9e984eafd625eca8aa *R/if-statement.R
feeb7ceed04236f03d5d0dcaa10da413 *R/like.R
9866f2eff35e9f87fbb5e56b95de4551 *R/make-parameters.R
e9a4325176139b4192c1ec7dd0a8f39d *R/misc.R
7ce999753f5c052048eb500fa4603f11 *R/model.R
aa7e76092ecc8e13bf149ab3f80f0309 *R/model_int.R
1b54137d4ae82b40a266122de6d1201b *R/multiSA-package.R
3666cca544069f9acbceb0a9dab83fb8 *R/plot.R
da036a443cfe0f7e73c3ebdd88214a4d *R/prior.R
4b2dd81ccbc32d489b0e80f6d503c13a *R/profile.R
55646e04827cb445487604dee5a2bb1b *R/report-int-data.R
4f06112c353cc82d0c4573d25e36ef3b *R/report-int-state.R
7ec209369e2823c4a298a960c14de750 *R/report-rmd.R
7f5c105a19c549dfcf1f9dc0b298c6b4 *R/resid.R
a005bef082a6e7f53de4bb862f77cbe9 *R/retrospective.R
ea49c329986b77e17b1df8b320edc740 *R/rtmb-methods.R
9a4036ebc1e05911f852e8be72ea0f5e *R/selectivity.R
2a4cdb4adf671612970445d6d60432bc *R/simulate.R
bc07bc518543c59daf3a6cddda4e2843 *R/zzz.R
ba10c3cb8c12f4dc1959e106c2cb4082 *README.md
9d40159f50a5fc9949cbfe95a2884126 *build/partial.rdb
42c303dc7bd13d8f571980f4b276278f *inst/include/MSAreport.Rmd
1854542872965930bcf1c04f2ceef0bf *inst/include/retrospective.Rmd
682ccdec5a242ebceffeacfdaceb1f7a *man/AD.Rd
4e14f82316331e864f8e3f8d4662f869 *man/CondExpLt.Rd
9acd9e6fa35edc25f04dec1e01cd0e8b *man/DCKMR-class.Rd
6265364ce753557552367ec575f736a8 *man/Dfishery-class.Rd
1af570c8ac41fa72344e6e5acf943226 *man/Dlabel-class.Rd
5f353b7ad988e558039e6f5e1ddd126e *man/Dmodel-class.Rd
6f64e76fea6e27ac512f94482799bd8c *man/Dstock-class.Rd
6a90802bd124d7d460b595a2b4069643 *man/Dsurvey-class.Rd
b4ac4d60b7c2f738706cba18477ebbeb *man/Dtag-class.Rd
77e2a0dcfb33e0c3a0c5024ac6e355f7 *man/MSAassess-class.Rd
685ad641724318266355d3fd3a7c092c *man/MSAdata-class.Rd
2c01eab0907376b1de0a1841ca652d06 *man/calc_F.Rd
5ad69ffebdcc94fa9026305165c4370d *man/calc_LAK.Rd
f029b9630c905b16990a93f5a70aa113 *man/calc_POP.Rd
6b296d37ec2c1359d3eb1c9f02b06b67 *man/calc_eqdist.Rd
6fe3006be2e87d65a810dcffe85c8b2b *man/calc_growth.Rd
7b34d9cb4ad954da8e82f73b9fff6e9e *man/calc_index.Rd
e42397aa4a8a88f2226048680bb16c90 *man/calc_nextN.Rd
f588c4d0cd98ddcdd542d96bad515b76 *man/calc_phi_project.Rd
7f534419caf07ebdcd6a073c80e16298 *man/calc_phi_simple.Rd
36966cbef4b2eaa09fbf75177f9f9f3a *man/calc_population.Rd
9e72589b6ebd085f6d0aa13a7e10fb74 *man/calc_recruitment.Rd
6a315b02943b2e51eae40d7ed413c2f6 *man/check_data.Rd
3ae83bf66aaa457e9b3126d5439097ec *man/conv_Sigma.Rd
a54086bbde2554b6dcf9838f53f82c02 *man/conv_mov.Rd
c2dd743c955858cbe08b2e31404966fa *man/conv_selpar.Rd
57a5aa997abfb5e1539f7f382928b9f6 *man/figures/README-hex.png
2e140ed00c9661ac5262ee7f6f501a93 *man/figures/intro-index-1.png
b61a4ac5699f60aebb6f928f3607462d *man/figures/intro-prof-1.png
83c720bcabb7fd564759ca70dbad41c8 *man/figures/intro-ret-1.png
b8b45a5e815808cbb737ec84b26c5df0 *man/fit_MSA.Rd
d4189d6c756a1b1d4409be4fca15ec0f *man/get_MSAdata.Rd
c6528692482f7a578784e954837f7f93 *man/get_sdreport.Rd
ef5a113c550c566b5f3392b9194ef459 *man/like_CKMR.Rd
3b7972c3584c7972c3cf08bbb15ba94d *man/like_comp.Rd
f75faa7a55511e0bcf1a49cfcbf30ad5 *man/make_parameters.Rd
5ef14bb1e6929e28d78f1b9d7c6a35cb *man/multiSA-package.Rd
fa852d4fb9e269423f94ef94b1b0aba4 *man/optimize_RTMB.Rd
df2265dc8239deca27cbb040d6e7ea0b *man/plot-MSA-data.Rd
d591dc0e8cc24c06cf62d21417d061be *man/plot-MSA-state.Rd
f826b1797c05814d5e42e9ceecbd92cb *man/posfun.Rd
9c9243ea035caf14eaef3126e1cc56ea *man/prior.Rd
2065da71111458c7dfdf700babaf00f2 *man/profile.Rd
58e5be4b7d2f096d42cd6df13b9fabe8 *man/report.Rd
edf2563678c812c0ab0390f6920e9f58 *man/residuals.Rd
09f31f87ee6f38ce9e9dab7d7412d376 *man/retrospective.Rd
ad3f0816c88b7565b5fa939dc9a4a0b1 *man/sapply2.Rd
c65419d7b473e7ce67e17589caeffa49 *man/simulate.Rd
0cb9728de8c2ee4b0c7dd6a478339fc4 *man/softmax.Rd
e8fb547e31624afb4169254bf4539b19 *man/summary.Rd
