c432161b94327901690ac4a7c0a38391 *DESCRIPTION
5a145c8debc509325fb17c7c4d0135c0 *LICENSE
7b588299df0c3f60680057542c8ff940 *NAMESPACE
ab4b7d1b1e26f85b9e2932e624465e0d *NEWS.md
7e907f629145a5d8651159337cdbc4a5 *R/add_rarefaction_metrics.R
b05814fd38bf700c616fd0e92401d73d *R/brcore_theme.R
c9df136fa17ec07f0ac4361fa94eaa97 *R/data.R
58882a31b46ffccd7b4d56e1da640ad8 *R/fit_neutral_model.R
f47360f42aec1151a67014d89955af83 *R/globals.R
0528c6d1d741281110a20cef8e0de261 *R/identify_core.R
88819195a10a97d0efa48812b13dfea4 *R/multi_rarefy.R
84999709aaae02839482d50b25cd481b *R/plot_abundance_occupancy.R
f182b88d09dc2bf49cdcf8b23f2e804a *R/plot_core_distribution.R
ba816954f6a5f016a9496845d67f0a12 *R/plot_identified_core.R
00c4266abc039a49d57bb98d1cc3e7eb *R/plot_neutral_model.R
6b9ca8174ad2b751cdc3e0c9a554a554 *R/plot_rarefaction_metrics.R
0341444355225587c783650ef22f8f89 *R/plot_variance_propagation.R
b1c37c6a7bffedba711d72efdc83073d *R/sncm.fit.R
d2e6e8650c1e973deccbe1c06e4b98a4 *R/update_otu_table.R
f6490f595c658128a265069e0413158f *R/utils-otu_class_checks.R
b56ff2b193ecba52f9ec7f3b10cca008 *R/utils-pipe.R
49e3bb78706e2926263eeea90dabdfe1 *README.md
aaaac576d8beafcc9ec68f5151c2cfa3 *build/vignette.rds
3da40224883d166d992f0b9ddfbc8131 *data/bcse.rda
3942c99c148cc2143b5bf0a61acc6c42 *data/bean.rda
7f6855c6f1d606ff182d74cb6445db40 *data/mimulus.rda
5dcc7c0b0ee38eb19569ca42579c7f03 *data/switchgrass.rda
a96c8f423e471447d2c106237fdad575 *data/switchgrass_core.rda
eea6f5879dfffec80b003c658e18150f *inst/doc/BRCore-vignette.Rmd
93d0a6e8ac8d2ad8d467ab2b9ee7b888 *inst/doc/BRCore-vignette.html
294bdc7bba029b1dcabe20104a0f6baf *man/add_rarefaction_metrics.Rd
3213f7b3b4723369de5d000b0e2746ea *man/bcse.Rd
710d2ac3a0b67f2abbe195a112f26d8b *man/bean.Rd
efa9d31a586ccf3e7bfffe856e2cd2cc *man/fit_neutral_model.Rd
0992b6f608dfb87437075a04c0fa2195 *man/identify_core.Rd
848c6531bb4beeda851d9ad792c51676 *man/mimulus.Rd
5f4cc2c56d5da9939bbee8c587fa0058 *man/multi_rarefy.Rd
8f4aad003a999fae004ba9361f9a99d6 *man/pipe.Rd
80998a133b2e5af2480223bc66181188 *man/plot_abundance_occupancy.Rd
5c3daf1e615167bca1eeb41b28359704 *man/plot_core_distribution.Rd
41f5ea1d08abc90ab6737acb6556fd78 *man/plot_identified_core.Rd
cdc42a216786b47e965ca09d5b643dba *man/plot_neutral_model.Rd
f4113c12a316b5ef5e338891c7b6cbdf *man/plot_rarefaction_metrics.Rd
7777d546c5e6a1e671cb364d09c18aec *man/plot_variance_propagation.Rd
50d3491cbbc452a939c9d32c16a04be1 *man/sncm.fit.Rd
8c512d67e150c51a9bf1cc2ac087aedd *man/switchgrass.Rd
5d90fda54608932053f58b3f54709fa0 *man/switchgrass_core.Rd
108d9991298e30f356da78f5ba786c36 *man/update_otu_table.Rd
5b0d13e9952cfedf73c208ea83739553 *tests/testthat.R
fce0c68b78eedbbb7f222a3269018a74 *tests/testthat/setup.R
4247442787cd8d00ac4cf91d05b485b8 *tests/testthat/test-add_rarefaction_metrics.R
591cec070982c98a6087ea6db5ab2dae *tests/testthat/test-fit_neutral_model.R
66fca196b93c7da9bdfcc9c20320a6ec *tests/testthat/test-identify_core.R
8f4903014b06ccfc4b7c9cde39ddef7d *tests/testthat/test-multi_rarefy.R
a2927481beca4eaeb99034fc733d9c07 *tests/testthat/test-plot_abundance_occupancy.R
8f4868911139dd2e21cf27a9d0ec6828 *tests/testthat/test-plot_core_distribution.R
6cee27c98a8034a0eceb0280b2fa5eeb *tests/testthat/test-plot_identified_core.R
204c3854d0035660b82fdf6aa5ad2e1d *tests/testthat/test-plot_neutral_model.R
2117b0eaf6f0bac747d2c26b49921585 *tests/testthat/test-plot_rarefaction_metrics.R
bfff5a6277e426b4a49ffe776d60b542 *tests/testthat/test-plot_variance_propagation.R
8e2f8c4070fd015b8dead6afb367cb73 *tests/testthat/test-update_otu_table.R
a207402621f37c8f13be996e2b7d96bf *tests/testthat/test-vignette-workflow.R
0b7b990ddd772380f1e362581fe59290 *tests/testthat/test_sets/README.md
7152041b0e96e3c95567961a09b88d42 *tests/testthat/test_sets/regenerate_test_data.R
eea6f5879dfffec80b003c658e18150f *vignettes/BRCore-vignette.Rmd
a6d55945d08b349fcd419ef186a34157 *vignettes/BRCore-vignette.Rmd.orig
35a7169f91ccd08554f89df2f777f84b *vignettes/images/fig1_plot_metrics-1.png
80bc09aaa96c1a8fc07978b0e81572c1 *vignettes/images/fig2_rarefaction_variance-1.png
79351fb528718436a7d818bd388e4cf1 *vignettes/images/fig3_identified_core-1.png
6ea33e50967562e79426ab0684cf3db7 *vignettes/images/fig4_plot_increase-1.png
718c4da660381c7c6f40308fa3891260 *vignettes/images/fig5_plot_elbow-1.png
b360ea3c3b03fdec2866f495230f9544 *vignettes/images/fig6_plot_type_bar-1.png
52ff8c9afff91a40bcf5bd379b5c7d1e *vignettes/images/fig7_plot_type_line-1.png
f97fb20e761ab413fbe1699e30e87ec3 *vignettes/images/fig8_plot_type_heatmap-1.png
40923d7b7e8c75fd59bc7d72109fa50d *vignettes/images/fig9_plot_neutral_fit-1.png
3a1ca88de4133f901dc27a79fc07d7c3 *vignettes/precompile.R
9bb713446a6a9b516479f1f6edd9b16b *vignettes/references.bib
