as_baseq_dna	as_baseq_dna
as_baseq_rna	as_baseq_rna
as_Biostrings	as_Biostrings
calculate_assembly_stats	calculate_assembly_stats
calculate_charge	calculate_charge
calculate_codon_usage	calculate_codon_usage
calculate_identity	calculate_identity
calculate_mw	calculate_mw
calculate_pi	calculate_pi
calculate_tm	calculate_tm
clean_file	clean_file
clean_seq	clean_seq
count_bases	count_bases
count_kmers	count_kmers
count_pattern	count_pattern
dna_to_protein	dna_to_protein
dna_to_rna	dna_to_rna
fastq_to_fasta	fastq_to_fasta
filter_fastq_quality	filter_fastq_quality
find_cpg_islands	find_cpg_islands
find_longest_orf	find_longest_orf
gc_content	gc_content
get_genetic_code	get_genetic_code
plot_aa_composition	plot_aa_composition
plot_dotplot	plot_dotplot
plot_gc_skew	plot_gc_skew
plot_hydrophobicity	plot_hydrophobicity
read_seq	read_seq
reverse_translate	reverse_translate
rev_comp	rev_comp
rna_to_dna	rna_to_dna
rna_to_protein	rna_to_protein
sars_fragment	sars_fragment
search_motif	search_motif
shuffle_sequence	shuffle_sequence
simulate_digestion	simulate_digestion
simulate_fasta	simulate_fasta
simulate_fastq	simulate_fastq
simulate_pcr	simulate_pcr
simulate_sequence	simulate_sequence
summarize_fasta	summarize_fasta
translate	translate
write_seq	write_seq
