A Logistic Regression Model for Testing Microbial Differential Abundance


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Documentation for package ‘LOCOM2’ version 1.0

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locom2 A logistic regression model for testing differential abundance in compositional microbiome data (LOCOM2)
throat.meta.filter Metadata of the throat microbiome samples
throat.otu.table.filter OTU count table from 16S sequencing of the throat microbiome samples
throat.otu.taxonomy Taxonomy names for OTUs from 16S sequencing of the throat microbiome samples