Bounded Outcome Risk Guard for Model Evaluation

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Documentation for package ‘BORG’ version 0.3.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

A B C P S

-- A --

as.data.frame.BorgDiagnosis	Coerce BorgDiagnosis to Data Frame
as.data.frame.BorgRisk	Coerce BorgRisk to Data Frame
audit_importance	Audit Feature Importance Calculations
audit_predictions	Audit Predictions for Data Leakage
autoplot.BorgDiagnosis	Autoplot Method for BorgDiagnosis Objects
autoplot.BorgRisk	Autoplot Method for BorgRisk Objects
autoplot.borg_comparison	Autoplot Method for borg_comparison Objects
autoplot.borg_cv	Autoplot Method for borg_cv Objects
autoplot.borg_fold_perf	Autoplot Method for borg_fold_perf Objects
autoplot.borg_result	Autoplot Method for borg_result Objects

-- B --

borg	BORG: Guard Your Model Evaluation
borg-wrappers	BORG-Guarded Cross-Validation Functions
BorgDiagnosis	BorgDiagnosis S4 Class
BorgDiagnosis-class	BorgDiagnosis S4 Class
BorgRisk	BorgRisk S4 Class
BorgRisk-class	BorgRisk S4 Class
borg_adversarial	Adversarial Validation
borg_aoa	Area of Applicability
borg_assimilate	Assimilate Leaky Evaluation Pipelines
borg_auto_check	Enable/Disable BORG Auto-Check Mode
borg_best_subset	Best Subset Variable Selection with Blocked CV
borg_block_size	Optimize Spatial Block Size
borg_bootstrap	Block Bootstrap Confidence Intervals for CV Metrics
borg_cache	Cache and Retrieve BORG Diagnoses
borg_cache_clear	Cache and Retrieve BORG Diagnoses
borg_cache_get	Cache and Retrieve BORG Diagnoses
borg_cache_info	Cache and Retrieve BORG Diagnoses
borg_cache_set	Cache and Retrieve BORG Diagnoses
borg_calibration	Model Calibration Diagnostics
borg_certificate	Create Validation Certificate
borg_check	Quick Leakage Check (Pipe-Friendly)
borg_check_coverage	Check Geographic Representativeness of CV Folds
borg_check_nested_cv	Check Nested CV for Leakage
borg_check_residuals	Check Residual Spatial Autocorrelation
borg_compare_cv	Compare Random vs Blocked Cross-Validation
borg_compare_models	Compare Multiple Models with Spatial CV
borg_conformal	Conformal Prediction with Spatial Dependence
borg_cv	Generate Valid Cross-Validation Scheme
borg_debias	Spatial+ Debiasing for Spatial Confounding
borg_di	Dissimilarity Index
borg_diagnose	Diagnose Data Dependency Structure
borg_disc_cv	Leave-Disc-Out Cross-Validation
borg_drift	Detect Distribution Shift Between Training and Deployment Data
borg_ensemble	Ensemble Predictions from CV Fold Models
borg_error_profile	Calibrate Dissimilarity Index to Prediction Error
borg_explain_risk	Explain Risks in Plain Language with Actionable Recommendations
borg_export	Export Validation Certificate
borg_extract	Extract Raster Values at Point Locations for BORG
borg_extrapolation	Detect Model Extrapolation
borg_fairness	Detect Performance Disparities Across Subgroups Under Blocked CV
borg_fold_performance	Evaluate Per-Fold Model Performance
borg_fold_similarity	Per-Fold Environmental Similarity (MESS)
borg_forward_selection	Forward Feature Selection with Spatial/Blocked CV
borg_geodist	Distance Distribution Diagnostics
borg_global_validation	Global (Pooled) Cross-Validation Metrics
borg_group_vfold_cv	BORG-Guarded group_vfold_cv
borg_importance	Block-Permutation Variable Importance
borg_initial_split	BORG-Guarded initial_split
borg_inspect	Inspect R Objects for Evaluation Risks
borg_leaflet	Interactive Leaflet Map of Spatial CV Folds
borg_literature_check	Scan Methods Text for Common Leakage Patterns
borg_local_moran	Local Moran's I for Residuals
borg_metrics	Available Classification Metrics
borg_multiscale	Multi-Scale Performance Assessment
borg_null_test	Null Model Significance Test
borg_options	Get Current BORG Options
borg_pipeline	Validate an Entire Modeling Pipeline
borg_power	Estimate Statistical Power After Blocking
borg_prediction_map	Spatial Prediction Uncertainty Map
borg_predict_raster	Predict onto a SpatRaster with AOA Masking
borg_register_hooks	Register BORG Hooks
borg_repeated_cv	Repeated Blocked Cross-Validation
borg_report	Generate BORG HTML Diagnostic Report
borg_rset	Convert BORG Folds to an rsample rset Object
borg_sample_design	Suggest Sampling Locations to Improve AOA
borg_shap	Spatial SHAP Values
borg_simulate	Generate Synthetic Data with Known Leakage
borg_spatial_cv	Spatial Block Cross-Validation (rsample-compatible)
borg_spatial_loo	Buffered Leave-One-Out Cross-Validation
borg_stability	Analyze CV Fold Stability Across Repeats
borg_stability_map	Prediction Stability Map
borg_temporal_cv	Temporal Block Cross-Validation (rsample-compatible)
borg_thin	Spatially Thin Occurrence Data
borg_to_biomod2	Convert BORG Folds to biomod2 Format
borg_to_enmeval	Convert BORG Folds to ENMeval Partition Format
borg_to_mlr3	mlr3 Resampling for BORG Cross-Validation
borg_trainControl	BORG-Guarded trainControl
borg_transferability	Assess Geographic Transferability
borg_unregister_hooks	Unregister BORG Hooks
borg_validate	Validate Complete Evaluation Workflow
borg_vfold_cv	BORG-Guarded vfold_cv
borg_willmott	Willmott's Index of Agreement
borg_workflow	Create a BORG Validation Workflow

-- C --

cv_leakage_report

Generate CV Leakage Report

-- P --

plot.BorgRisk	Plot BORG Objects
plot.borg_comparison	Plot CV Comparison Results
plot.borg_result	Plot BORG Result Objects
print.borg_cv_report	Print CV Leakage Report

-- S --

show-method	BorgDiagnosis S4 Class
show-method	BorgRisk S4 Class
summary.BorgDiagnosis	Summarize BORG Diagnosis
summary.BorgRisk	Summarize BORG Risk Assessment
summary.borg_cv	Summarize BORG Cross-Validation
summary.borg_pipeline	Summarize BORG Pipeline Validation
summary.borg_power	Summarize BORG Power Analysis
summary.borg_result	Summarize BORG Result